Haplo Stats version 1 5 0 otatistical Methods for Haplotypes When Linkage Phase is Ambiguous Jason P Sinnwell and Daniel J Schaid Mayo Clinic Division of Health Sciences Research Rochester MN USA December 5 2011 sinnwell amp mayo edu Contents 1 Introduction ll Updates 4c 525i ee a nA RAD ee A Se su 1 2 Operating System and Installation e Led VRB ASICS ae uke Ree en ce blot a a fc Seu Ge SET teen eh ee Data Setup 2 1 Example Datan ino aov Poe Se R
Package haplo stats October 1 2009 Version 1 4 4 Date 2009 10 Title Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous Author Sinnwell JP Schaid DJ Maintainer Jason P Sinnwell lt sinnwell jason mayo edu gt Description A suite of S PLUS R routines for the analysis of indirectly measured haplotypes The statistical methods assume that all subjects are unrelated and that haplotypes are ambiguous due to unknown linkage phase of
MalHaploFregq A computer program for estimating malaria allele and haplotype frequences from their prevalences in blood samples using Maximum Likelihood methodology Written collated by Ian Hastings Liverpool School of Tropical Medicine Notes Version 1 1 for Programme Version 1 1 1 Latest versions of the programme and user notes are available on pcwww liv ac uk hastings MalHaploFreq Contents 1 Basic principles using Maximum Likelihood ML methodology to estimat
Haplo Stats User Manual Version 1 1 0 Statistical Methods for Haplotypes when Linkage Phase is Ambiguous Jason P Sinnwell and Daniel J Schaid Mayo Clinic Rochester MN Contact Information Send feedback and questions by email to Jason Sinnwell sinnwell mayo edu Revision Date Monday October 27 2003 nH nan bk WO N m 10 11 12 Table of Contents Brief Description Operating System and Installation New Features Getting Started Preview for M
MalHaploFreq A computer program for estimating malaria allele and haplotype frequences from their prevalences in blood samples using Maximum Likelihood methodology Written collated by Ian Hastings Liverpool School of Tropical Medicine Notes Version 2 1 1 for Programme Version 2 1 1 Latest versions of the programme and user notes are available on pewww liv ac uk hastings MalHaploFreq Contents What s new in Version 2 1 1 1 Basic principles using Maximum Likeli
4a mom HAPLOSEARCH SOFWARE User s Manual http www haplosite com haplosearch c INDEX Mc INTRODUCTION rem 3 2 DATA FORMAT csi ranas a dias ais 4 2 Eadcm iii dl di a Dt A 4 2 2 IBAPLOTYBES editae testet 5 aj POINT MUTATIONS ccoo oia ira prnl 5 b BEIDEROPLASMY ctt aaa 6 ce UNDELS D A 7 de UNPUTDATA FILES 8 3 1 T