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F1ToM v1 0 USER MANUAL Introduction FrToM is a computer program for the detection of binding sites in DNA or RNA sequences It implements several methods described in the literature to compute an approximation of binding affinity for a particular site based on a collection of binding sequences provided by the user Using this method FrToM scans a sequence file looking for putative binding sites across the DNA RNA sequence in both strands and filters the results according to a
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