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1. DOCK 5 - UCSF DOCK

DOCK 5 3 User Manual Irwin D Kuntz Demetri T Moustakas P Therese Lang University of California 2005 Last updated October 2005 General Overview Ligand File I O Currently only MOL2 file I O is supported Ligands are read in from a single MOL2 or multi MOL2 file Atom and bond types are assigned using the DOCK 4 atom bond typing parameter files vdw defn flex defn flex_table defn More information about all of these files can be found in the Appendix There are
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